Publications
AI-driven Simulation and Design Lab
Name*: Contributed equally
Name: Corresponding author
Direct visualization of floppy 2D DNA origami using cryo-EM
*Heng Ni, *Galio Guo, *Feng Zhou, Jae Young Lee, Ned Seeman, Do-Nyun Kim, Nan Yao, Paul Chaikin, and Yimo Han
iScience, 25: 104373, (2022)
Formation of non-base-pairing DNA microgels using directed phase transition of amphiphilic monomers
*Chanseok Lee, *Sungho Do, Jae Young Lee, Minju Kim, Sang Moon Kim, Yongdae Shin, and Do-Nyun Kim
Nucleic Acids Research, 50: 4187-4196, (2022)
Predicting the free-form shape of structured DNA assemblies from their lattice-based design blueprint
Jae Gyung Lee, Kyung Soo Kim, Jae Young Lee, and Do-Nyun Kim
ACS Nano, 16: 4289–4297, (2022)
Overlapping finite element analysis for structures under thermal loads with spatially varying gradients
Namkyu Kim, Giseok Yun, and Do-Nyun Kim
Journal of Mechanical Science and Technology, 36: 1379-1390, (2022)
Accelerated AFM characterization via deep-learning-based image super-resolution
Young-Joo Kim, Jaekyung Lim, and Do-Nyun Kim
Small, 18: 2103779, (2021)
Characterizing and harnessing the mechanical properties of short single-stranded DNA in structured assemblies
*Jae Young Lee, *Myoungseok Kim, Chanseok Lee, and Do-Nyun Kim
ACS Nano, 15: 20430-20441, (2021)
Modulating the chemo-mechanical response of structured DNA assemblies through binding molecules
Chanseok Lee*, Young-Joo Kim*, Kyung Soo Kim, Jae Young Lee and Do-Nyun Kim
Nucleic Acids Research, 49: 12591–12599, (2021)
The flexibility-based modulation of the DNA nanostar phase separation
*Sungho Do, *Taehyun Lee, Jae Gyung Lee, Do-Nyun Kim, and Yongdae Shin
Nanoscale, 13: 17638-17647, (2021)
Design approaches and computational tools for DNA nanostructures
Heeyuen Koh, Jae Gyung Lee, Jae Young Lee, Ryan Kim, Osamu Tabata, Jin-Woo Kim, and Do-Nyun Kim
IEEE Open Journal of Nanotechnology, 2: 86-100, (2021)
Programming ultrasensitive threshold response through chemomechanical instability
Young-Joo Kim, Junho Park, Jae Young Lee and Do-Nyun Kim
Nature Communications, 12: 5177, (2021)
Adversarial defect detection in semiconductor manufacturing process
Jaehoon Kim, Yunhyoung Nam, Mincheol Kang, Kihyun Kim, Jisuk Hong, Sooryong Lee and Do-Nyun Kim
IEEE Transactions on Semiconductor Manufacturing, 34: 365-371, (2021)
Experimental and numerical investigation on the dent resistance of a dual phase steel originated from the yield-point phenomenon
Jaehyun Kim, Hongwoo Lee, Kyungseok Oh, Dong-Yoon Seok, Sungsoo Park, Yeonsik Kang and Do-Nyun Kim
Journal of Materials Processing Technology, 289: 116929, (2021)
Rapid computational analysis of DNA origami assemblies at near-atomic resolution
Jae Young Lee, Jae Gyung Lee, Giseok Yun, Chanseok Lee, Young-Joo Kim, Kyung Soo Kim, Tae Hwi Kim and Do-Nyun Kim
ACS Nano, 15: 1002-1015, (2021)
Harnessing distinct deformation modes of auxetic patterns for stiffness design of tubular structures
Jeong Min Hur*, Dong-Sik Seo*, Kiyean Kim, Jun Kyu Lee, Kwang Je Lee, Yoon Young Kim and Do-Nyun Kim
Materials & Design, 198: 109376, (2021)
Computational studies for the yield-point phenomenon of metals
Jaehyun Kim and Do-Nyun Kim
Multiscale Science and Engineering, 2: 90-106, (2020)
